Posts by Tag

R

From zero to 3D with kernel density

13 minute read

Obtaining data from publicly accessible databases, cleaning it up, and creating 3D density maps has become quite popular lately. In this post, I will explore...

Quantile plot

5 minute read

This post describes a simple quantile plot with count data. I was working on a dataset with count data and wanted to make a quick plot to check the trend of ...

Eat Your Data!

2 minute read

If you have ever found yourself in a situation where you didn’t know what to do next with the data you have in hands, then there is a very high probability t...

Plotting 4 variables in a single plot

8 minute read

Visualizing the relation between two variables using a simple plot is a common task. When we have many variables, we often try to reduce dimensionality first...

Applications of Phylin (Part 3 of 3)

7 minute read

This is the last post of a series of 3 dedicated to phylin. The idea was to show different uses of phylin that would go beyond the typical application of the...

The Game of Life

5 minute read

The Conway’s Game of Life always fascinated me. Just some apparently living squares that could remain alive or die accordingly to just a few rules. In fact, ...

Applications of Phylin (Part 2 of 3)

9 minute read

The previous post started a series of 3 posts dedicated to the package that I have developed with my colleagues. After using 3 dimensional distance matrices,...

Applications of Phylin (Part 1 of 3)

7 minute read

Last September I was invited to make a post on the Molecular Ecology Spotlight. This was a small post to highlight some of the main features of the phylin R ...

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Phylin

Applications of Phylin (Part 3 of 3)

7 minute read

This is the last post of a series of 3 dedicated to phylin. The idea was to show different uses of phylin that would go beyond the typical application of the...

Applications of Phylin (Part 2 of 3)

9 minute read

The previous post started a series of 3 posts dedicated to the package that I have developed with my colleagues. After using 3 dimensional distance matrices,...

Applications of Phylin (Part 1 of 3)

7 minute read

Last September I was invited to make a post on the Molecular Ecology Spotlight. This was a small post to highlight some of the main features of the phylin R ...

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Plotting

From zero to 3D with kernel density

13 minute read

Obtaining data from publicly accessible databases, cleaning it up, and creating 3D density maps has become quite popular lately. In this post, I will explore...

Quantile plot

5 minute read

This post describes a simple quantile plot with count data. I was working on a dataset with count data and wanted to make a quick plot to check the trend of ...

Plotting 4 variables in a single plot

8 minute read

Visualizing the relation between two variables using a simple plot is a common task. When we have many variables, we often try to reduce dimensionality first...

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GameR

Eat Your Data!

2 minute read

If you have ever found yourself in a situation where you didn’t know what to do next with the data you have in hands, then there is a very high probability t...

The Game of Life

5 minute read

The Conway’s Game of Life always fascinated me. Just some apparently living squares that could remain alive or die accordingly to just a few rules. In fact, ...

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Georeferencing

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spatial

Converting QGIS layer to kmz

3 minute read

I have developed layer2kmz plug-in for QGIS that allows to convert a layer in QGIS to kmz format. The advantage of this plugin over other translations to kml...

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qgis

Converting QGIS layer to kmz

3 minute read

I have developed layer2kmz plug-in for QGIS that allows to convert a layer in QGIS to kmz format. The advantage of this plugin over other translations to kml...

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plug-in

Converting QGIS layer to kmz

3 minute read

I have developed layer2kmz plug-in for QGIS that allows to convert a layer in QGIS to kmz format. The advantage of this plugin over other translations to kml...

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Climate change

Applications of Phylin (Part 2 of 3)

9 minute read

The previous post started a series of 3 posts dedicated to the package that I have developed with my colleagues. After using 3 dimensional distance matrices,...

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Resistance

Applications of Phylin (Part 2 of 3)

9 minute read

The previous post started a series of 3 posts dedicated to the package that I have developed with my colleagues. After using 3 dimensional distance matrices,...

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Game of Life

The Game of Life

5 minute read

The Conway’s Game of Life always fascinated me. Just some apparently living squares that could remain alive or die accordingly to just a few rules. In fact, ...

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Contact zone

Applications of Phylin (Part 3 of 3)

7 minute read

This is the last post of a series of 3 dedicated to phylin. The idea was to show different uses of phylin that would go beyond the typical application of the...

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Jaccard distance

Applications of Phylin (Part 3 of 3)

7 minute read

This is the last post of a series of 3 dedicated to phylin. The idea was to show different uses of phylin that would go beyond the typical application of the...

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Biodiversity

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Distributions

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sunburst

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D3.js

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python

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IUCN

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simulation

Simple simulation of life with JS

7 minute read

There is no direction or intent in evolution. However, an idea that evolution has a goal towards some sense of perfection seems quite prevalent on the societ...

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evolution

Simple simulation of life with JS

7 minute read

There is no direction or intent in evolution. However, an idea that evolution has a goal towards some sense of perfection seems quite prevalent on the societ...

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javascript

Simple simulation of life with JS

7 minute read

There is no direction or intent in evolution. However, an idea that evolution has a goal towards some sense of perfection seems quite prevalent on the societ...

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Snake Game

Eat Your Data!

2 minute read

If you have ever found yourself in a situation where you didn’t know what to do next with the data you have in hands, then there is a very high probability t...

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Beginner level

Quantile plot

5 minute read

This post describes a simple quantile plot with count data. I was working on a dataset with count data and wanted to make a quick plot to check the trend of ...

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QGIS

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Blender

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GIMP

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GEBCO

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Tutorial

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3D map

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Python

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GDAL

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GIS

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GBIF

From zero to 3D with kernel density

13 minute read

Obtaining data from publicly accessible databases, cleaning it up, and creating 3D density maps has become quite popular lately. In this post, I will explore...

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Kernel density

From zero to 3D with kernel density

13 minute read

Obtaining data from publicly accessible databases, cleaning it up, and creating 3D density maps has become quite popular lately. In this post, I will explore...

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Raven

From zero to 3D with kernel density

13 minute read

Obtaining data from publicly accessible databases, cleaning it up, and creating 3D density maps has become quite popular lately. In this post, I will explore...

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Rayshader

From zero to 3D with kernel density

13 minute read

Obtaining data from publicly accessible databases, cleaning it up, and creating 3D density maps has become quite popular lately. In this post, I will explore...

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